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234,440 Structures from the PDB

1,068,577 Computed Structure Models (CSM)

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QUERY: Gene Name = "Aat"

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Search Summary

This query matches 44 Structures.

Refinements

Structure Determination Methodology

experimental (44)

Scientific Name of Source Organism

	Homo sapiens (25)
	Escherichia coli K-12 (8)
	Escherichia coli (6)
	Arabidopsis thaliana (5)
	Mus musculus (2)
	synthetic construct (1)

Taxonomy

	Eukaryota (30)
	Bacteria (14)
	other sequences (1)

Experimental Method

X-RAY DIFFRACTION (44)

Polymer Entity Type

Protein (44)

Refinement Resolution (Å)

	1.0 - 1.5 (3)
	1.5 - 2.0 (18)
	2.0 - 2.5 (10)
	2.5 - 3.0 (8)
	3.0 - 3.5 (4)
	3.5 - 4.0 (1)

Release Date

	2005 - 2009 (11)
	2010 - 2014 (12)
	2015 - 2019 (14)
	2020 - 2024 (7)

Enzyme Classification Name

Transferases (19)

Symmetry Type

	Asymmetric (30)
	Cyclic (14)

SCOP Classification

	Alpha and beta proteins (a/b) (13)
	Artifacts (8)
	Multi-domain proteins (alpha and beta) (13)
	Alpha and beta proteins (a+b) (6)
	All beta proteins (2)

AllSelected

1 to 25 of 44 Structures

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2QUG \| pdb_00002qug	Download File View File

Crystal structure of alpha-1-antitrypsin, crystal form A

Hansen, G., Morton, C.J., Pearce, M.C., Feil, S.C., Adams, J.J., Parker, M.W., Bottomley, S.P.

(2008) Protein Sci 17: 2127-2133

Released	2008-08-12
Method	X-RAY DIFFRACTION 2 Å
Organisms	Homo sapiens
Macromolecule	Alpha-1-antitrypsin (protein)

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2Z3K \| pdb_00002z3k	Download File View File

complex structure of LF-transferase and rAF

Watanabe, K., Toh, Y., Tomita, K.

(2007) Nature 449: 867-871

Released	2007-10-23
Method	X-RAY DIFFRACTION 2.85 Å
Organisms	Escherichia coli
Macromolecule	Leucyl/phenylalanyl-tRNA-protein transferase (protein)
Unique Ligands	PHE, TAR, XYA

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2Z3L \| pdb_00002z3l	Download File View File

complex structure of LF-transferase and peptide A

Watanabe, K., Toh, Y., Tomita, K.

(2007) Nature 449: 867-871

Released	2007-10-23
Method	X-RAY DIFFRACTION 2.75 Å
Organisms	Escherichia coli
Macromolecule	Leucyl/phenylalanyl-tRNA-protein transferase (protein) peptide (PHE)(ARG)(TYR)(LEU)(GLY) (protein)
Unique Ligands	TAR

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2Z3M \| pdb_00002z3m	Download File View File

complex structure of LF-transferase and dAF

Watanabe, K., Toh, Y., Tomita, K.

(2007) Nature 449: 867-871

Released	2007-10-23
Method	X-RAY DIFFRACTION 2.7 Å
Organisms	Escherichia coli
Macromolecule	Leucyl/phenylalanyl-tRNA-protein transferase (protein)
Unique Ligands	3D1, PHE, TAR

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2Z3N \| pdb_00002z3n	Download File View File

complex structure of LF-transferase and peptide B

Watanabe, K., Toh, Y., Tomita, K.

(2007) Nature 449: 867-871

Released	2007-10-23
Method	X-RAY DIFFRACTION 2.5 Å
Organisms	Escherichia coli
Macromolecule	Leucyl/phenylalanyl-tRNA-protein transferase (protein) peptide (PHE)(ARG)(TYR)(LEU)(GLY) (protein)
Unique Ligands	TAR

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2Z3O \| pdb_00002z3o	Download File View File

complex structure of LF-transferase and phenylalanine

Watanabe, K., Toh, Y., Tomita, K.

(2007) Nature 449: 867-871

Released	2007-10-23
Method	X-RAY DIFFRACTION 2.4 Å
Organisms	Escherichia coli
Macromolecule	Leucyl/phenylalanyl-tRNA-protein transferase (protein)
Unique Ligands	PHE, TAR

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2Z3P \| pdb_00002z3p	Download File View File

complex structure of LF-transferase and leucine

Watanabe, K., Toh, Y., Tomita, K.

(2007) Nature 449: 867-871

Released	2007-10-23
Method	X-RAY DIFFRACTION 2.5 Å
Organisms	Escherichia coli
Macromolecule	Leucyl/phenylalanyl-tRNA-protein transferase (protein)
Unique Ligands	LEU, TAR

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3CWL \| pdb_00003cwl	Download File View File

Crystal structure of alpha-1-antitrypsin, crystal form B

Morton, C.J., Hansen, G., Feil, S.C., Adams, J.J., Parker, M.W.

(2008) Protein Sci 17: 2127-2133

Released	2008-09-23
Method	X-RAY DIFFRACTION 2.44 Å
Organisms	Homo sapiens
Macromolecule	Alpha-1-antitrypsin (protein)
Unique Ligands	CL

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3CWM \| pdb_00003cwm	Download File View File

Crystal structure of alpha-1-antitrypsin complexed with citrate

Morton, C.J., Hansen, G., Feil, S.C., Adams, J.J., Parker, M.W.

(2008) Protein Sci 17: 2127-2133

Released	2008-09-23
Method	X-RAY DIFFRACTION 2.51 Å
Organisms	Homo sapiens
Macromolecule	Alpha-1-antitrypsin (protein)
Unique Ligands	CIT

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3DRM \| pdb_00003drm	Download File View File

2.2 Angstrom Crystal Structure of Thr114Phe Alpha1-Antitrypsin

Gooptu, B., Nobeli, I., Purkiss, A., Phillips, R.L., Mallya, M., Lomas, D.A., Barrett, T.E.

(2009) J Mol Biology 387: 857-868

Released	2009-03-31
Method	X-RAY DIFFRACTION 2.2 Å
Organisms	Homo sapiens
Macromolecule	Alpha-1-antitrypsin (protein)

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3DRU \| pdb_00003dru	Download File View File

Crystal Structure of Gly117Phe Alpha1-Antitrypsin

Gooptu, B., Nobeli, I., Purkiss, A., Phillips, R.L., Mallya, M., Lomas, D.A., Barrett, T.E.

(2009) J Mol Biology 387: 857-868

Released	2009-03-31
Method	X-RAY DIFFRACTION 3.2 Å
Organisms	Homo sapiens
Macromolecule	Alpha-1-antitrypsin (protein)

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3NDD \| pdb_00003ndd	Download File View File

Cleaved antitrypsin with P10 Pro, and P9-P6 Asp

Yamasaki, M., Sendall, T.J., Huntington, J.A.

(2010) J Biological Chem 285: 30752-30758

Released	2010-07-28
Method	X-RAY DIFFRACTION 1.5 Å
Organisms	Homo sapiens
Macromolecule	Alpha-1-antitrypsin (protein)

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3NDF \| pdb_00003ndf	Download File View File

Cleaved antitrypsin with P8-P6 Asp

Huntington, J.A., Sendall, T.J., Yamasaki, M.

(2010) J Biological Chem 285: 30752-30758

Released	2010-07-28
Method	X-RAY DIFFRACTION 2.7 Å
Organisms	Homo sapiens
Macromolecule	Alpha-1-antitrypsin (protein)

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3NE4 \| pdb_00003ne4	Download File View File

1.8 Angstrom structure of intact native wild-type alpha-1-antitrypsin

Patschull, A.O.M., Gooptu, B., Segu, L.

(2011) Acta Crystallogr Sect F Struct Biol Cryst Commun 67: 1492-1497

Released	2011-12-14
Method	X-RAY DIFFRACTION 1.81 Å
Organisms	Homo sapiens
Macromolecule	Alpha-1-antitrypsin (protein)

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3T1P \| pdb_00003t1p	Download File View File

Crystal structure of an alpha-1-antitrypsin trimer

Huntington, J.A., Yamasaki, M.

(2011) EMBO Rep 12: 1011-1017

Released	2011-08-17
Method	X-RAY DIFFRACTION 3.9 Å
Organisms	Homo sapiens
Macromolecule	Alpha-1-antitrypsin (protein)

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4F5F \| pdb_00004f5f	Download File View File

Structure of Aspartate Aminotransferase Conversion to Tyrosine Aminotransferase: Chimera P1.

Addington, T.A., Fisher, A.J., Toney, M.D.

(2013) J Mol Biology 425: 1378-1389

Released	2013-02-13
Method	X-RAY DIFFRACTION 2.25 Å
Organisms	Escherichia coli K-12
Macromolecule	Aspartate aminotransferase (protein)

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4F5G \| pdb_00004f5g	Download File View File

Rational Design and Directed Evolution of E. coli Apartate Aminotransferase to Tyrosine Aminotransferase: Mutant P2.

Addington, T.A., Fisher, A.J., Toney, M.D.

(2013) J Mol Biology 425: 1378-1389

Released	2013-02-13
Method	X-RAY DIFFRACTION 1.67 Å
Organisms	Escherichia coli K-12
Macromolecule	Aspartate aminotransferase (protein)

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4F5H \| pdb_00004f5h	Download File View File

Intercoversion of Substrate Specificity: E. coli Aspatate Aminotransferase to Tyrosine Aminotransferase: Chimera P3.

Addington, T.A., Fisher, A.J., Toney, M.D.

(2013) J Mol Biology 425: 1378-1389

Released	2013-02-13
Method	X-RAY DIFFRACTION 1.6 Å
Organisms	Escherichia coli K-12
Macromolecule	Aspartate aminotransferase (protein)

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4F5I \| pdb_00004f5i	Download File View File

Substrate Specificity Conversion of E. coli Pyridoxal-5'-Phosphate Dependent Aspartate Aminotransferase to Tyrosine Aminotransferase: Chimera P4.

Addington, T.A., Fisher, A.J., Toney, M.D.

(2013) J Mol Biology 425: 1378-1389

Released	2013-02-13
Method	X-RAY DIFFRACTION 2.2 Å
Organisms	Escherichia coli K-12
Macromolecule	Aspartate aminotransferase (protein)
Unique Ligands	MPD

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4F5J \| pdb_00004f5j	Download File View File

Rational Design and Directed Evolution for Conversion of Substrate Specificity from E.coli Aspartate Aminotransferase to Tyrosine Aminotransferase: Mutant P5.

Addington, T.A., Fisher, A.J., Toney, M.D.

(2013) J Mol Biology 425: 1378-1389

Released	2013-02-13
Method	X-RAY DIFFRACTION 1.954 Å
Organisms	Escherichia coli K-12
Macromolecule	Aspartate aminotransferase (protein)

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4F5K \| pdb_00004f5k	Download File View File

Substrate Specificity Conversion of Aspartate Aminotransferase to Tyrosine Aminotransferase By The JANUS Algorithm: Chimera P6.

Addington, T.A., Fisher, A.J., Toney, M.D.

(2013) J Mol Biology 425: 1378-1389

Released	2013-02-13
Method	X-RAY DIFFRACTION 2.2 Å
Organisms	Escherichia coli K-12
Macromolecule	Aspartate aminotransferase (protein)

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4F5L \| pdb_00004f5l	Download File View File

A Theoretical Optimized Mutant for the Conversion of Substrate Specificity and Activity of Aspartate Aminotransferase to Tyrosine Aminotransferase: Chimera P7.

Addington, T.A., Fisher, A.J., Toney, M.D.

To be published

Released	2013-05-15
Method	X-RAY DIFFRACTION 1.4 Å
Organisms	Escherichia coli K-12
Macromolecule	Aspartate aminotransferase (protein)
Unique Ligands	EDO

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4F5M \| pdb_00004f5m	Download File View File

Wild-Type E. coli Aspartate Aminotransferase: A Template For The Interconversion of Substrate Specificity and Activity To Tyrosine Aminotransferase By The JANUS Algorithm.

Addington, T.A., Fisher, A.J., Toney, M.D.

(2013) J Mol Biology 425: 1378-1389

Released	2013-02-13
Method	X-RAY DIFFRACTION 1.65 Å
Organisms	Escherichia coli K-12
Macromolecule	Aspartate aminotransferase (protein)
Unique Ligands	EDO

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4PYW \| pdb_00004pyw	Download File View File

1.92 angstrom crystal structure of A1AT:TTAI ternary complex

Nyon, M.P., Day, J., Gooptu, B.

(2015) Protein Sci 24: 1301-1312

Released	2015-06-10
Method	X-RAY DIFFRACTION 1.91 Å
Organisms	Homo sapiens synthetic construct
Macromolecule	ACE-THR-THR-ALA-ILE-NH2 (protein) Alpha-1-antitrypsin (protein)
Unique Ligands	GOL